Presentations

Microscopy References and Education

Introduction to Light Microscopy Class

📄 Introduction to Light Microscopy at CALM

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Kari’s 2020 Webinars (box links)

• Introduction to Fiji
• Introduction to Fiji/Image J Macros
• Colocalization
• Cell Profiler
• Figure Making

2011 Microscopy Bootcamp Lectures

📄 Introduction to Light Microscopy - Kurt Thorn

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📄 Fluorescence, Fluorescent Microscopy and Probes - Nico Stuurman

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📄 Digital Cameras in Microscopy - Kurt Thorn

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📄 Micro-Manager - Nico Stuurman

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📄 Generating Contrast in Light Microscopy - Orion Weiner

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📄 Optical Sectioning - Bo Huang

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Kurt’s Microscopy Presentations

📄 Microscopy Overview I

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📄 Microscopy Overview II

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📄 Experimental Design for Microscopy

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📄 Fluorescence Microscopy and Small Molecule Dyes

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📄 Microscopy Optics I

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📄 Microscopy Optics II

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📄 Cameras

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📄 Confocal Microscopy

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📄 Digital Image Analysis

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📄 Brightfield Contrasting Techniques

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📄 Genetically Encoded Tags

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📄 FRET and Biosensors

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📄 Superresolution Localization Microscopy

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Presentations From Spring 2010 - Principles and Practice of Light Microscopy - Cell Biology 210

📄 1 - Introduction to microscopy; optics, magnification, and objectives - Kurt Thorn

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📄 2 - Resolution and Aberrations - Kurt Thorn

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📄 3 - Phase / DIC - Orion Weiner

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📄 4 - Fluorescence Optics - Nico Stuurman

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📄 5 - Fluorescent Probes and Labelling - Nico Stuurman

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📄 6 - Advanced Techniques: FRAP / FLIP / FRET / etc.

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📄 7 - Cameras and Light Sources

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📄 8 - High Throughput Imaging and Image Analysis

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📄 9 - Optical Sectioning, Confocal and TIRF

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📄 10 - Deconvolution

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📄 11 - Super-resolution

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📄 12 - Live Cell / Animal Imaging, Multiphoton - Max Krummel

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📄 13 - Optical Control of Living Systems - Orion Weiner

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📄 14 - Electron Microscopy - Yifan Cheng

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Presentations from the 3rd Bangalore Microscopy Course

📄 Frequency Space and Fourier Transforms

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📄 DIC and Polarized Light Microscopy

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Alice’s Presentation on Sample Prep

📄 Sample Prep

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